Welcome to emodpy

The emodpy package is a collection of Python scripts for using EMOD. It integrates the configuring of EMOD with idmtools ability to run a model on different platforms. Typical use of emodpy is as part of a disease specific package like emodpy-malaria or emodpy-hiv.

See idmtools documentation for a diagram showing how idmtools and each of the related packages are used in an end-to-end workflow using EMOD as the disease transmission model.

Installation

The emodpy package is currently available on a Python package index server managed by the Institute for Disease Modeling.

Typically, emodpy is installed as part of emodpy-malaria or emodpy-hiv.. It can be installed independently as below:

pip install emodpy --extra-index-url=https://packages.idmod.org/api/pypi/pypi-production/simple